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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47049223_47051508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47049223 - 47051508

Intron Length:

2286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTTTTCTGAACT

Flanking Amino Acid:

PLKDDYIKTHRENSPATFPD

Intron Amino Acid Position:

769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.8

35.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

71.7

0.49

0.9

66.3

34.2

Minor 5ss

31.4

-2.1

3.2

40.8

45.4

Minor BPS

82.4

1.1

1.2

96.74

27.7

Associated Gene:

Gene:

CTDP1

Ensembl Gene ID:

ENSAPLG00000014757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023618

47002088 - 47089167

87080

ENSAPLT00000015393

47002088 - 47089167

87080

ENSAPLT00000038873

47002088 - 47089167

87080