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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47176259_47181722_F

Intron Information:

Intron Rank:

142475

Intron Class:

major

Intron Phase:

Intron Coordinates:

47176259 - 47181722

Intron Length:

5464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

GTCAATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

GTGCTGTCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.8

41.8

Major BPS

69.8

0.49

70.3

31.8

Major PPT

0.56

65.2

45.2

Minor 5ss

33.5

-1.9

3.4

45.9

43.3

Minor BPS

44.7

-0.3

2.1

61.83

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032096

47176095 - 47182786

6692