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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47185316_47216529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47185316 - 47216529

Intron Length:

31214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCTTTCTTTACA

Flanking Amino Acid:

EELDQMYLDDVNEIIRNDLS

Intron Amino Acid Position:

875

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

92.2

0.95

0.6

87.4

23.1

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

0.65

1.6

78.67

37.8

Associated Gene:

Gene:

NFATC1

Ensembl Gene ID:

ENSAPLG00000013017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047354

47185159 - 47292798

107640

ENSAPLT00000046870

47185159 - 47297675

112517