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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47198195_47216529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47198195 - 47216529

Intron Length:

18335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTGACTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATGTCCTTGACT

Flanking Amino Acid:

EELDQMYLDDGHQPQKCCIP

Intron Amino Acid Position:

892

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.36

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

82.7

1.11

89.61

34.7

Associated Gene:

Gene:

NFATC1

Ensembl Gene ID:

ENSAPLG00000013017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025344

47198145 - 47292798

94654