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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47216726_47216836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47216726 - 47216836

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

AACCTATTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

CATCTGTTACCC

Flanking Amino Acid:

QSSHIMLQPQSCSPTHSSIM

Intron Amino Acid Position:

827

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

79.3

31.1

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

73.3

0.53

0.9

66.1

38.9

Minor 5ss

28.1

-2.5

2.7

31.6

42.6

Minor BPS

44.8

-0.4

2.2

56.04

42.5

Associated Gene:

Gene:

NFATC1

Ensembl Gene ID:

ENSAPLG00000013017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047354

47185159 - 47292798

107640

ENSAPLT00000046870

47185159 - 47297675

112517

ENSAPLT00000025344

47198145 - 47292798

94654