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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47229273_47231960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47229273 - 47231960

Intron Length:

2688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACAAAA

5'SS Class:

major

3'SS Sequence:

CCTCATTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTCTCCTCATTC

Flanking Amino Acid:

YQLFTYLPANGENSQWIQGH

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.2

69.6

36.5

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

69.3

0.44

0.8

61.4

34.7

Minor 5ss

38.5

-1.3

2.9

45.8

43.6

Minor BPS

58.1

0.23

1.8

70.35

41.6

Associated Gene:

Gene:

NFATC1

Ensembl Gene ID:

ENSAPLG00000013017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020186

47226994 - 47292798

65805