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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47249322_47251899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47249322 - 47251899

Intron Length:

2578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTAACTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTCTTCTAACT

Flanking Amino Acid:

LQVASNPIECSQRSAQELPL

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.65

0.9

69.4

41.3

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

65.7

0.57

1.6

85.74

33.9

Associated Gene:

Gene:

NFATC1

Ensembl Gene ID:

ENSAPLG00000013017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046870

47185159 - 47297675

112517

ENSAPLT00000025344

47198145 - 47292798

94654

ENSAPLT00000020186

47226994 - 47292798

65805

ENSAPLT00000013577

47185313 - 47292798

107486

ENSAPLT00000047354

47185159 - 47292798

107640