Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_4749159_4750793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4749159 - 4750793

Intron Length:

1635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTG

5'SS Class:

major

3'SS Sequence:

TTGATTGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AGTACATTAATT

Flanking Amino Acid:

ISVNVRKTFKMWNNSKSLIK

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

72.6

39.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

73.7

0.53

65.9

45.2

Minor 5ss

46.3

-0.4

2.4

58.6

Minor BPS

63.6

0.5

1.6

77.71

38.1

Associated Gene:

Gene:

DLEC1

Ensembl Gene ID:

ENSAPLG00000006960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007244

4735783 - 4772320

36538