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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_4765237_4766008_F

Intron Information:

Intron Rank:
31
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
4765237 - 4766008
Intron Length:
772

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAACTGA
5'SS Class:
major
3'SS Sequence:
GTTTTGTTGTCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CATTTAT
U12 Branch Point Sequence:
TTATCCAGAACT
Flanking Amino Acid:
ALGFMSLDGKLAKTVPDKVL
Intron Amino Acid Position:
1382

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.3
0.69
1
68.3
39.5
Major BPS
76.3
0.65
1
67.3
39.3
Major PPT
77.3
0.62
1
76.9
42.1
Minor 5ss
42.6
-0.8
3
56.2
47.9
Minor BPS
67.6
0.63
1.7
87.53
36.9

Associated Gene:

Gene:
DLEC1
Ensembl Gene ID:
ENSAPLG00000006960
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007244
4735783 - 4772320
36538