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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_4767034_4767926_F

Intron Information:

Intron Rank:
34
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
4767034 - 4767926
Intron Length:
893

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTAGGCTCA
5'SS Class:
major
3'SS Sequence:
CCTCTTCCCACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATCTTAT
U12 Branch Point Sequence:
GTCATCTGAATT
Flanking Amino Acid:
LVLYPQQNMLVKVSFHTTLE
Intron Amino Acid Position:
1509

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.8
0.51
1.1
61.3
40.2
Major BPS
82.6
0.81
0.8
71.7
36
Major PPT
77.6
0.62
0.7
71.8
26.4
Minor 5ss
42.9
-0.8
3.1
53.2
46
Minor BPS
56.9
0.29
1.5
69.95
41.1

Associated Gene:

Gene:
DLEC1
Ensembl Gene ID:
ENSAPLG00000006960
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007244
4735783 - 4772320
36538