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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47815975_47829623_R

Intron Information:

Intron Rank:

149752

Intron Class:

major

Intron Phase:

Intron Coordinates:

47815975 - 47829623

Intron Length:

13649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

GTGCTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

92.4

0.95

0.6

88.1

21.7

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

55.6

0.25

1.6

69.58

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031632

47815204 - 47851044

35841