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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47856971_47857424_F

Intron Information:

Intron Rank:

146679

Intron Class:

major

Intron Phase:

Intron Coordinates:

47856971 - 47857424

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGCTT

5'SS Class:

major

3'SS Sequence:

TTTCTTTCCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

AGTATCTTATTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

66.7

44.4

Major BPS

82.6

0.81

0.8

71.7

Major PPT

0.74

0.7

77.4

31.3

Minor 5ss

34.6

-1.7

3.8

55.3

48.9

Minor BPS

54.1

0.12

1.6

62.89

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024971

47851977 - 47858945

6969