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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47860589_47863719_F

Intron Information:

Intron Rank:

146683

Intron Class:

major

Intron Phase:

Intron Coordinates:

47860589 - 47863719

Intron Length:

3131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGACTGT

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

CTCTGTTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

44.1

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

84.7

0.78

0.8

78.9

33.2

Minor 5ss

43.5

-0.7

3.3

64.5

46.9

Minor BPS

48.9

-0

2.1

62.32

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034422

47859422 - 47864531

5110