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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4786188_4786885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4786188 - 4786885

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAA

U12 Branch Point Sequence:

TCTGCTCTCCCC

Flanking Amino Acid:

GEGYGRKADVWSVACTVVEM

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

56.2

0.15

64.6

32.2

Major PPT

75.5

0.57

0.9

68.7

37.2

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

-1.3

3.6

53.9

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005843

4785563 - 4809112

23550

ENSAPLT00000045850

4785563 - 4804497

18935