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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4787687_4789759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4787687 - 4789759

Intron Length:

2073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

TGGTCCTTACGG

Flanking Amino Acid:

LSIFVEYMPGGSIKDQLKAY

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

68.9

0.47

59.6

38.6

Major PPT

74.9

0.56

0.9

69.3

36.9

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

52.3

-0

59.68

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045850

4785563 - 4804497

18935

ENSAPLT00000005843

4785563 - 4809112

23550