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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4791852_4793371_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4791852 - 4793371

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GATGCAAGAAAC

Flanking Amino Acid:

SHPKDGLDCMEFDIPFCERF

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.2

39.9

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

85.8

0.8

0.7

77.7

Minor 5ss

43.5

-0.7

2.9

52.9

44.1

Minor BPS

40.1

-0.7

49.54

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045850

4785563 - 4804497

18935

ENSAPLT00000005843

4785563 - 4809112

23550