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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4793440_4795348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4793440 - 4795348

Intron Length:

1909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATATAATAAAAC

Flanking Amino Acid:

SCQSLDRSVDSPPFTQTPVP

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

0.72

78.4

31.2

Major PPT

0.88

0.6

84.1

23.9

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

44.5

-0.4

2.1

57.69

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045850

4785563 - 4804497

18935

ENSAPLT00000005843

4785563 - 4809112

23550