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Intron Name: Anas_platyrhynchos_platyrhynchos_2_47952403_47953700_F

Intron Information:

Intron Rank:

130286

Intron Class:

major

Intron Phase:

Intron Coordinates:

47952403 - 47953700

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAG

5'SS Class:

major

3'SS Sequence:

TCATGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

AGGCCCTAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

38.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.72

0.9

76.4

37.4

Minor 5ss

35.4

-1.7

3.3

45.9

49.3

Minor BPS

50.6

0.1

1.8

66.25

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036792

47952184 - 47955298

3115