Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_4802770_4804194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4802770 - 4804194

Intron Length:

1425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGCTCC

5'SS Class:

major

3'SS Sequence:

GTCTGATCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TTTGTCTGATCC

Flanking Amino Acid:

ILVSAPKKANLLQPNNSKQH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

64.9

35.9

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

68.2

0.41

0.9

58.3

42.2

Minor 5ss

42.1

-0.9

55.9

41.8

Minor BPS

54.3

0.11

1.8

70.59

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045850

4785563 - 4804497

18935

ENSAPLT00000005843

4785563 - 4809112

23550