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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48187245_48190800_R

Intron Information:

Intron Rank:

130258

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48187245 - 48190800

Intron Length:

3556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGCTCT

5'SS Class:

weak_major

3'SS Sequence:

TTCTCATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AGTGTCTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.1

65.7

40.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

85.3

0.79

0.8

77.2

Minor 5ss

49.4

-0

2.8

75.9

39.2

Minor BPS

57.2

0.22

1.7

66.51

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024991

48183829 - 48237272

53444

ENSAPLT00000033079

48183829 - 48195802

11974