Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_48432773_48433516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48432773 - 48433516

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATAAG

5'SS Class:

major

3'SS Sequence:

CATGTTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

AGGTTTCCATGT

Flanking Amino Acid:

SFTGSTETGKILLKHAAGTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.4

40.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

75.9

0.58

0.9

73.2

36.9

Minor 5ss

33.4

-1.9

41.6

Minor BPS

35.5

-1

1.9

47.17

39.2

Associated Gene:

Gene:

ALDH5A1

Ensembl Gene ID:

ENSAPLG00000010739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011213

48411808 - 48434655

22848

ENSAPLT00000033690

48428066 - 48434655

6590