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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48446127_48447150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48446127 - 48447150

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

GTTACAATACCT

Flanking Amino Acid:

ELDFGYLASNWYVPVKDLAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

78.9

0.65

0.9

76.8

37.4

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

46.9

-0.1

2.1

72.22

43.7

Associated Gene:

Gene:

GPLD1

Ensembl Gene ID:

ENSAPLG00000011058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044688

48444673 - 48461998

17326

ENSAPLT00000020034

48444673 - 48461998

17326

ENSAPLT00000011543

48444673 - 48459966

15294