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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48449366_48451041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48449366 - 48451041

Intron Length:

1676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTATTTTAACA

Flanking Amino Acid:

KCTREHKDSYINKQSKNEHR

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

84.3

0.77

0.9

81.1

35.2

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

77.6

0.86

1.1

83.48

30.3

Associated Gene:

Gene:

GPLD1

Ensembl Gene ID:

ENSAPLG00000011058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020034

48444673 - 48461998

17326

ENSAPLT00000011543

48444673 - 48459966

15294