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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48454204_48455120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48454204 - 48455120

Intron Length:

917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

AATCCTTTCATA

Flanking Amino Acid:

SVGSQFLTYKGAVYVYFGTK

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

80.7

33.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

70.6

0.46

0.9

37.1

Minor 5ss

37.6

-1.4

50.5

Minor BPS

53.4

0.1

1.7

64.21

36.2

Associated Gene:

Gene:

GPLD1

Ensembl Gene ID:

ENSAPLG00000011058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044688

48444673 - 48461998

17326

ENSAPLT00000020034

48444673 - 48461998

17326