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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48563953_48573057_F

Intron Information:

Intron Rank:

124600

Intron Class:

major

Intron Phase:

Intron Coordinates:

48563953 - 48573057

Intron Length:

9105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTATTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CATTCTTTATTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.4

41.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

89.1

0.88

0.7

84.3

29.1

Minor 5ss

43.9

-0.7

2.8

58.1

46.5

Minor BPS

61.6

0.36

1.6

67.86

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025185

48563393 - 48576034

12642