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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48615988_48644537_F

Intron Information:

Intron Rank:

138481

Intron Class:

major

Intron Phase:

Intron Coordinates:

48615988 - 48644537

Intron Length:

28550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TGTATCTGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

81.8

38.5

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

70.6

0.46

0.9

64.7

41.4

Minor 5ss

44.9

-0.5

2.9

58.5

45.8

Minor BPS

49.7

0.06

1.7

70.11

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031114

48614673 - 48645626

30954