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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48649936_48677867_F

Intron Information:

Intron Rank:

142499

Intron Class:

major

Intron Phase:

Intron Coordinates:

48649936 - 48677867

Intron Length:

27932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

TTCTTCTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

TTCTTCTCTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.9

Major BPS

63.3

0.33

1.1

41.2

Major PPT

0.88

0.6

24.2

Minor 5ss

37.1

-1.5

3.2

48.4

47.2

Minor BPS

56.1

0.18

1.9

71.06

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025858

48649831 - 48683898

34068