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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4869660_4870987_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4869660 - 4870987

Intron Length:

1328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCCTCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTGTGATGAAGC

Flanking Amino Acid:

MGAEWFEHLLVDYDVCSNYG

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

59.3

0.21

1.7

65.4

36.2

Minor 5ss

34.5

-1.8

3.4

44.4

Minor BPS

44.1

-0.4

2.3

60.22

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005459

4862070 - 4873216

11147