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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48699105_48706543_F

Intron Information:

Intron Rank:

136692

Intron Class:

major

Intron Phase:

Intron Coordinates:

48699105 - 48706543

Intron Length:

7439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCACTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

AATTCCCTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.47

42.7

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

63.9

0.52

1.6

79.3

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043849

48698684 - 48709823

11140

ENSAPLT00000018879

48695476 - 48709823

14348