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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48733917_48771507_F

Intron Information:

Intron Rank:

135775

Intron Class:

major

Intron Phase:

Intron Coordinates:

48733917 - 48771507

Intron Length:

37591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCTCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAGAAT

U12 Branch Point Sequence:

GTCTTCTCAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.2

80.7

33.8

Major BPS

47.1

-0.1

1.4

53.7

38.6

Major PPT

74.6

0.55

0.9

70.5

34.9

Minor 5ss

37.4

-1.4

2.6

43.1

36.9

Minor BPS

51.4

0.04

1.8

64.01

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025058

48733126 - 48771851

38726