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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4874901_4878305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4874901 - 4878305

Intron Length:

3405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGCGC

5'SS Class:

major

3'SS Sequence:

TGTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GGAGCCTCACGT

Flanking Amino Acid:

DVLVDLAASVEEDCKKYLKR

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.8

44.4

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

85.9

0.81

0.8

80.6

Minor 5ss

25.2

-2.8

3.1

24.6

37.1

Minor BPS

41.8

-0.5

2.1

54.56

46.5

Associated Gene:

Gene:

MYD88

Ensembl Gene ID:

ENSAPLG00000026818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033937

4874525 - 4883362

8838