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Intron Name: Anas_platyrhynchos_platyrhynchos_2_48789422_48793151_F

Intron Information:

Intron Rank:

131985

Intron Class:

major

Intron Phase:

Intron Coordinates:

48789422 - 48793151

Intron Length:

3730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCCTGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.3

0.43

63.2

42.1

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

1.08

1.2

91.78

26.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042134

48788630 - 48798641

10012