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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4879187_4879819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4879187 - 4879819

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCGGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTCCCTTGACT

Flanking Amino Acid:

WSISGELIERRCRRMVVVIS

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.5

0.48

44.6

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

80.5

1.04

1.1

89.05

35.6

Associated Gene:

Gene:

MYD88

Ensembl Gene ID:

ENSAPLG00000026818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033937

4874525 - 4883362

8838