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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4916624_4927426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4916624 - 4927426

Intron Length:

10803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAC

5'SS Class:

major

3'SS Sequence:

TATCTTTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTCCACTTAACC

Flanking Amino Acid:

DYLHKNGQIHRDVKAGNILL

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

32.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

81.6

0.71

0.8

77.1

31.1

Minor 5ss

46.6

-0.3

2.5

61.2

43.7

Minor BPS

70.5

0.62

1.5

77.28

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004054

4893703 - 4948969

55267