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Intron Name: Anas_platyrhynchos_platyrhynchos_2_49237460_49237730_R

Intron Information:

Intron Rank:

136799

Intron Class:

major

Intron Phase:

Intron Coordinates:

49237460 - 49237730

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

ACTCCTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TGTTTCTTTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

0.6

65.6

41.1

Major PPT

75.5

0.57

0.9

68.9

36.4

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

0.84

1.6

88.66

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020097

49236710 - 49238317

1608