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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4940637_4942446_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4940637 - 4942446

Intron Length:

1810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTCTACCT

Flanking Amino Acid:

SSCLQKDPEKRPTAAELLRH

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.8

0.8

0.7

29.9

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

64.3

0.53

1.9

88.42

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040626

4923759 - 5048193

124435

ENSAPLT00000038229

4923759 - 4949055

25297