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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4942496_4944529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4942496 - 4944529

Intron Length:

2034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TTTTTTTTTCCC

Flanking Amino Acid:

LRHKFFTKAKNKEFLQEKML

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

93.7

0.98

0.6

88.2

29.1

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

44.3

-0.4

3.6

73.48

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040626

4923759 - 5048193

124435

ENSAPLT00000038229

4923759 - 4949055

25297