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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4944965_4948849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4944965 - 4948849

Intron Length:

3885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGGTCCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

GCAATAATAACT

Flanking Amino Acid:

EGRAAISQLRSPRVKEPVQN

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

62.3

43.9

Major BPS

70.1

0.5

70.3

31.9

Major PPT

100

1.12

0.4

100

Minor 5ss

29.6

-2.3

3.1

33.4

41.7

Minor BPS

45.6

-0.2

1.9

60.55

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040626

4923759 - 5048193

124435

ENSAPLT00000038229

4923759 - 4949055

25297

ENSAPLT00000004054

4893703 - 4948969

55267