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Intron Name: Anas_platyrhynchos_platyrhynchos_2_49486_88425_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

49486 - 88425

Intron Length:

38940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCAAAC

U12 Branch Point Sequence:

TTTTTCTGTTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

48.4

-0.1

52.9

28.9

Major PPT

73.1

0.52

0.8

65.7

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

41.2

-0.5

3.6

75.98

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020394

3263 - 88619

85357