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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4948886_5048100_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4948886 - 5048100

Intron Length:

99215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTATGCAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACACAT

U12 Branch Point Sequence:

TTTCCCCTACAC

Flanking Amino Acid:

RVKEPVQNSELFQTACYPTA

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

69.9

0.49

75.2

29.8

Major PPT

57.8

0.18

1.1

58.5

35.2

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

49.8

-0

2.1

70.28

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040626

4923759 - 5048193

124435