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Intron Name: Anas_platyrhynchos_platyrhynchos_2_49524005_49526011_R

Intron Information:

Intron Rank:

141124

Intron Class:

major

Intron Phase:

Intron Coordinates:

49524005 - 49526011

Intron Length:

2007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTACTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TCTTACTCAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

67.5

0.39

62.8

37.4

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

55.8

0.16

1.9

69.27

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036224

49386372 - 49526446

140075

ENSAPLT00000034120

49413622 - 49526446

112825

ENSAPLT00000023604

49386372 - 49526446

140075