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Intron Name: Anas_platyrhynchos_platyrhynchos_2_49630651_49634507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49630651 - 49634507

Intron Length:

3857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTGTGCCTGACA

Flanking Amino Acid:

RNIPCAVHSQTVAAVLVLDL

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

35.3

Major BPS

0.72

78.4

31.2

Major PPT

84.4

0.77

0.7

77.3

31.4

Minor 5ss

38.5

-1.3

3.1

50.7

45.7

Minor BPS

52.4

0.07

2.1

71.13

41.2

Associated Gene:

Gene:

CDKAL1

Ensembl Gene ID:

ENSAPLG00000005820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020209

49630486 - 50106635

476150