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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4982439_4997900_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4982439 - 4997900

Intron Length:

15462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AGTTATTAAACT

Flanking Amino Acid:

PSSDRQKTSKPLLKEVCASC

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

86.4

0.82

0.7

84.4

23.4

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

57.1

0.3

1.8

76.07

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047837

4976564 - 4999790

23227

ENSAPLT00000018217

4976564 - 5016398

39835