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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4989980_4991458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4989980 - 4991458

Intron Length:

1479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCATCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

TGTCCTTCCATC

Flanking Amino Acid:

SQKSIASHKKPVNLSKEEHQ

Intron Amino Acid Position:

1668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

0.37

1.3

76.1

Major PPT

71.8

0.49

0.9

67.1

32.8

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

47.2

-0.2

1.9

60.66

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042989

4988465 - 4996481

8017

ENSAPLT00000039591

4988465 - 4999432

10968

ENSAPLT00000000962

4988465 - 4999432

10968