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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4996166_4996294_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4996166 - 4996294

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

GTTTCCCTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

73.5

0.59

81.3

29.9

Major PPT

72.3

0.5

72.1

33.1

Minor 5ss

38.7

-1.3

3.1

51.6

45.2

Minor BPS

62.2

0.24

1.9

70.82

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042989

4988465 - 4996481

8017