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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4997955_4999192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4997955 - 4999192

Intron Length:

1238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TTTGATGTCATT

Flanking Amino Acid:

AAAHGGPTQPTTVKDSSTPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.6

37.4

Major BPS

0.65

1.1

77.4

37.3

Major PPT

81.5

0.71

0.9

73.1

42.1

Minor 5ss

34.4

-1.8

3.2

45.9

42.3

Minor BPS

-0.5

2.5

67.74

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047837

4976564 - 4999790

23227

ENSAPLT00000039591

4988465 - 4999432

10968

ENSAPLT00000018217

4976564 - 5016398

39835

ENSAPLT00000000962

4988465 - 4999432

10968