Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_4999351_4999786_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4999351 - 4999786

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATAACCG

5'SS Class:

major

3'SS Sequence:

GTCTCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

GGAAACACAACT

Flanking Amino Acid:

MDERTLSFLDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.8

0.25

1.1

45.9

42.2

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

79.4

0.66

0.9

76.4

37.7

Minor 5ss

37.3

-1.4

3.1

40.2

45.5

Minor BPS

43.2

-0.4

1.9

58.65

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047837

4976564 - 4999790

23227