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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50036939_50101519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50036939 - 50101519

Intron Length:

64581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTGATATGGATT

Flanking Amino Acid:

QLAAYGYKITDNSAEADLWL

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

83.5

0.75

0.7

76.8

31.9

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

46.1

-0.2

1.7

64.97

39.7

Associated Gene:

Gene:

CDKAL1

Ensembl Gene ID:

ENSAPLG00000005820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020209

49630486 - 50106635

476150

ENSAPLT00000006034

49621502 - 50106635

485134

ENSAPLT00000029326

49713986 - 50106635

392650

ENSAPLT00000029323

49691326 - 50106635

415310

ENSAPLT00000024180

49625294 - 50106635

481342