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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50104055_50106551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50104055 - 50106551

Intron Length:

2497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTCTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TCTTCTCTAATG

Flanking Amino Acid:

SKGISVVLKKMPAACDSVLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

82.2

0.8

0.9

81.6

Major PPT

63.6

0.31

1.1

63.5

36.7

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

61.8

0.23

1.7

67.5

40.9

Associated Gene:

Gene:

CDKAL1

Ensembl Gene ID:

ENSAPLG00000005820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024180

49625294 - 50106635

481342

ENSAPLT00000020209

49630486 - 50106635

476150

ENSAPLT00000006034

49621502 - 50106635

485134

ENSAPLT00000029326

49713986 - 50106635

392650

ENSAPLT00000029323

49691326 - 50106635

415310