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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50115151_50117952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50115151 - 50117952

Intron Length:

2802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

ATTACTATAACA

Flanking Amino Acid:

TRLEVPDPVEQSALIHLSST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

0.65

1.1

77.4

37.3

Major PPT

79.4

0.66

0.9

81.2

36.5

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

64.1

0.44

1.6

75.76

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006043

50114044 - 50123761

9718